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* TestNH ([http://biopp.univ-montp2.fr/forge/testnh]) is a package dedicated to the testing of non-homogeneous process in sequence evolution.
 
* TestNH ([http://biopp.univ-montp2.fr/forge/testnh]) is a package dedicated to the testing of non-homogeneous process in sequence evolution.
  
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Here you can find some statistics on the libraries:
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* [[Statistics | Evolution of libraries content]]
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* [https://docs.google.com/spreadsheet/pub?key=0AnLekVVvhmNCdEkzRVl2aWExWXRpMnZ3Vi1NTWhEWmc&single=true&gid=0&output=html A comparison of performance of Bio++ based likelihood computation with other software]
 
Bio++ and BppSuite are published under the [http://en.wikipedia.org/wiki/CeCILL CeCILL] [http://www.cecill.info/index.en.html] free software licence (GPL-compatible).
 
Bio++ and BppSuite are published under the [http://en.wikipedia.org/wiki/CeCILL CeCILL] [http://www.cecill.info/index.en.html] free software licence (GPL-compatible).

Revision as of 10:31, 31 October 2014

Bio++ is a set of C++ libraries for Bioinformatics, including sequence analysis, phylogenetics, molecular evolution and population genetics. Bio++ is Object Oriented and is designed to be both easy to use and computer efficient. Bio++ intends to help programmers to write computer expensive programs, by providing them a set of re-usable tools.

Get the libraries Browse the documentation Ask for help on the forum
Get the Bio++ program suite Report a bug Discuss future developments


This wiki gathers tutorial articles and examples for developers willing to use the Bio++ libraries in their programs.


In addition to those libraries, several executable are available:

  • BppSuite (homepage) is a suite of ready-to-use programs for phylogenetic and sequence
  • Bpp Phyview ([1]) is a Qt based visual interface for of trees (needs bpp-qt).
  • TestNH ([2]) is a package dedicated to the testing of non-homogeneous process in sequence evolution.

Here you can find some statistics on the libraries:

Bio++ and BppSuite are published under the CeCILL [3] free software licence (GPL-compatible).