Difference between revisions of "Bio++ Versions"

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(Created page with "This page keeps track of all Bio++ versions. == Development version == The development version can be fetched with git from [http://biopp.univ-montp2.fr/git/], see [[Installati...")
 
(Update v2.4.0 + v2.3.0)
 
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This page keeps track of all Bio++ versions.
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This page keeps track of all Bio++ versions. For installation, see [[Installation]].
  
 
== Development version ==
 
== Development version ==
  
The development version can be fetched with git from [http://biopp.univ-montp2.fr/git/], see [[Installation]].
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The development version can be fetched with git from [https://github.com/BioPP], see [[Installation#Development_version]].
  
Information and documentation can be found at  and [http://biopp.univ-montp2.fr/forge/ http://biopp.univ-montp2.fr/forge/].
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== Bio++ 2.4 ==
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Bio++ 2.4 is the latest version, released in April 2018. source code is available from github [https://github.com/BioPP].
 +
 
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It is composed of :
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* bpp-core 2.4.0
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* bpp-seq 2.4.0
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* bpp-phyl 2.4.0
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* bpp-popgen 2.4.0
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* bpp-raa 2.4.0
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* bpp-qt 2.4.0
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* bpp-seq-omics 2.4.0
 +
* bpp-phyl-omics 2.4.0
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* bppsuite 2.4.0 (Note: bppsuite version number is now indexed on the one of the libraries)
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* bppphyview 0.6.0
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== Bio++ 2.3 ==
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Bio++ 2.3 was released in May 2017. Source code is now available from github [https://github.com/BioPP].
 +
 
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It is composed of :
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* bpp-core 2.3.0
 +
* bpp-seq 2.3.0
 +
* bpp-phyl 2.3.0
 +
* bpp-popgen 2.3.0
 +
* bpp-raa 2.3.0
 +
* bpp-qt 2.3.0
 +
* bpp-seq-omics 2.3.0
 +
* bpp-phyl-omics 2.3.0
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* bppsuite 2.3.0 (Note: bppsuite version number is now indexed on the one of the libraries)
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* bppphyview 0.5.0
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== Bio++ 2.2 ==
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Bio++ 2.2 was released in October 2014 [http://biopp.univ-montp2.fr/archives/2014/10/index.html].
 +
 
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It is composed of :
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* bpp-core 2.2.0
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* bpp-seq 2.2.0
 +
* bpp-phyl 2.2.0
 +
* bpp-popgen 2.2.0
 +
* bpp-raa 2.2.0
 +
* bpp-qt 2.2.0
 +
* bpp-seq-omics 2.2.0
 +
* bpp-phyl-omics 2.2.0
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* bppsuite 2.2.0 (Note: bppsuite version number is now indexed on the one of the libraries)
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* bppphyview 0.4.0
 +
 
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== Bio++ 2.1 ==
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Bio++ 2.1 was released in March 2013 [http://biopp.univ-montp2.fr/archives/2013/03/index.html].
 +
 
 +
It is composed of :
 +
* bpp-core 2.1.0
 +
* bpp-seq 2.1.0
 +
* bpp-phyl 2.1.0
 +
* bpp-popgen 2.1.0
 +
* bpp-raa 2.1.0
 +
* bpp-qt 2.1.0
 +
* bpp-seq-omics 2.1.0
 +
* bpp-phyl-omics 2.1.0
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* bppsuite 0.8.0
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* bppphyview 0.3.0
  
 
== Bio++ 2.0 ==
 
== Bio++ 2.0 ==
  
Bio++ 2.0 is the currently maintained release. It was released in February 2011 [http://biopp.univ-montp2.fr/archives/2011/02/index.html#e2011-02-08T17_39_32.txt].
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Bio++ 2.0 was released in February 2011 [http://biopp.univ-montp2.fr/archives/2011/02/index.html#e2011-02-08T17_39_32.txt].
  
 
It is composed of :
 
It is composed of :
* ??
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* bpp-core 2.0.3
 
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* bpp-seq 2.0.3
For intermediate releases, please refer to the {{Bio++ home page}}.
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* bpp-phyl 2.0.3
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* bpp-popgen 2.0.3
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* bpp-raa 2.0.3
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* bpp-qt 2.0.2
  
 
== Bio++ 1.9 ==
 
== Bio++ 1.9 ==
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It is composed of :
 
It is composed of :
* ??
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* bpp-utils 1.5.0
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* bpp-numcalc 1.8.0
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* bpp-seq 1.7.0
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* bpp-phyl 1.9.0
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* bpp-popgen 1.5.0
  
 
== Bio++ 1.8 ==
 
== Bio++ 1.8 ==
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It is composed of :
 
It is composed of :
* Bpp-Utils 1.4
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* bpp-utils 1.4.0
* Bpp-NumCalc 1.7
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* bpp-numcalc 1.7.0
* Bpp-Seq 1.6
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* bpp-seq 1.6.0
* Bpp-Phyl 1.8
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* bpp-phyl 1.8.0
* Bpp-PopGen 1.4
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* bpp-popgen 1.4.0
 
 
Remark: In contrast with latter versions, which use CMake, Bio++ 1.8 uses Autotools.
 
 
 
== Installing an old version ==
 
  
Installing a previous version of the libraries is necessary when maintaining or modifying programs that depend on those libraries. The prefered procedure is to compile from sources.
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Remark: Bio++ 1.8 uses Autotools, in contrast with later versions which use CMake.

Latest revision as of 08:03, 30 April 2018

This page keeps track of all Bio++ versions. For installation, see Installation.

Development version

The development version can be fetched with git from [1], see Installation#Development_version.

Bio++ 2.4

Bio++ 2.4 is the latest version, released in April 2018. source code is available from github [2].

It is composed of :

  • bpp-core 2.4.0
  • bpp-seq 2.4.0
  • bpp-phyl 2.4.0
  • bpp-popgen 2.4.0
  • bpp-raa 2.4.0
  • bpp-qt 2.4.0
  • bpp-seq-omics 2.4.0
  • bpp-phyl-omics 2.4.0
  • bppsuite 2.4.0 (Note: bppsuite version number is now indexed on the one of the libraries)
  • bppphyview 0.6.0

Bio++ 2.3

Bio++ 2.3 was released in May 2017. Source code is now available from github [3].

It is composed of :

  • bpp-core 2.3.0
  • bpp-seq 2.3.0
  • bpp-phyl 2.3.0
  • bpp-popgen 2.3.0
  • bpp-raa 2.3.0
  • bpp-qt 2.3.0
  • bpp-seq-omics 2.3.0
  • bpp-phyl-omics 2.3.0
  • bppsuite 2.3.0 (Note: bppsuite version number is now indexed on the one of the libraries)
  • bppphyview 0.5.0

Bio++ 2.2

Bio++ 2.2 was released in October 2014 [4].

It is composed of :

  • bpp-core 2.2.0
  • bpp-seq 2.2.0
  • bpp-phyl 2.2.0
  • bpp-popgen 2.2.0
  • bpp-raa 2.2.0
  • bpp-qt 2.2.0
  • bpp-seq-omics 2.2.0
  • bpp-phyl-omics 2.2.0
  • bppsuite 2.2.0 (Note: bppsuite version number is now indexed on the one of the libraries)
  • bppphyview 0.4.0

Bio++ 2.1

Bio++ 2.1 was released in March 2013 [5].

It is composed of :

  • bpp-core 2.1.0
  • bpp-seq 2.1.0
  • bpp-phyl 2.1.0
  • bpp-popgen 2.1.0
  • bpp-raa 2.1.0
  • bpp-qt 2.1.0
  • bpp-seq-omics 2.1.0
  • bpp-phyl-omics 2.1.0
  • bppsuite 0.8.0
  • bppphyview 0.3.0

Bio++ 2.0

Bio++ 2.0 was released in February 2011 [6].

It is composed of :

  • bpp-core 2.0.3
  • bpp-seq 2.0.3
  • bpp-phyl 2.0.3
  • bpp-popgen 2.0.3
  • bpp-raa 2.0.3
  • bpp-qt 2.0.2

Bio++ 1.9

Bio++ 1.9 was released in April 2010 [7].

It is composed of :

  • bpp-utils 1.5.0
  • bpp-numcalc 1.8.0
  • bpp-seq 1.7.0
  • bpp-phyl 1.9.0
  • bpp-popgen 1.5.0

Bio++ 1.8

Bio++ 1.8 was released in June 2008 [8].

It is composed of :

  • bpp-utils 1.4.0
  • bpp-numcalc 1.7.0
  • bpp-seq 1.6.0
  • bpp-phyl 1.8.0
  • bpp-popgen 1.4.0

Remark: Bio++ 1.8 uses Autotools, in contrast with later versions which use CMake.