bpp::GeneMapperCsvExport::Record Class Reference

Store one line of the GeneMapper file. More...

#include <Bpp/PopGen/GeneMapperCsvExport.h>

Collaboration diagram for bpp::GeneMapperCsvExport::Record:

List of all members.

Public Member Functions
	Record (const std::string &row)
	Constructor.
const std::string &	getSampleFileName () const
const std::string &	getSampleName () const
const std::string &	getPanel () const
const std::string &	getMarkerName () const
const std::string &	getDye () const
const size_t	getNumberOfAllele () const
const GeneMapperCsvExport::Allele &	getAllele (size_t allelePos) const
Private Attributes
std::string	sampleFile_
std::string	sampleName_
std::string	panel_
std::string	markerName_
std::string	dye_
std::vector < GeneMapperCsvExport::Allele >	alleles_
std::string	dac_
double	an_

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Detailed Description

Store one line of the GeneMapper file.

Definition at line 160 of file GeneMapperCsvExport.h.

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Constructor & Destructor Documentation

GeneMapperCsvExport::Record::Record

(

const std::string &

row

)

Constructor.

Parameters:

row	One row of the file as a std::string

Definition at line 201 of file GeneMapperCsvExport.cpp.

References alleles_, an_, dac_, dye_, bpp::StringTokenizer::getToken(), markerName_, bpp::StringTokenizer::numberOfRemainingTokens(), panel_, sampleFile_, sampleName_, and bpp::TextTools::toDouble().

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Member Function Documentation

const GeneMapperCsvExport::Allele& bpp::GeneMapperCsvExport::Record::getAllele

(

size_t

allelePos

)

const [inline]

Definition at line 204 of file GeneMapperCsvExport.h.

References alleles_.

const std::string& bpp::GeneMapperCsvExport::Record::getDye

(

)

const [inline]

Definition at line 196 of file GeneMapperCsvExport.h.

References dye_.

const std::string& bpp::GeneMapperCsvExport::Record::getMarkerName

(

)

const [inline]

Definition at line 192 of file GeneMapperCsvExport.h.

References markerName_.

const size_t bpp::GeneMapperCsvExport::Record::getNumberOfAllele

(

)

const [inline]

Definition at line 200 of file GeneMapperCsvExport.h.

References alleles_.

const std::string& bpp::GeneMapperCsvExport::Record::getPanel

(

)

const [inline]

Definition at line 188 of file GeneMapperCsvExport.h.

References panel_.

const std::string& bpp::GeneMapperCsvExport::Record::getSampleFileName

(

)

const [inline]

Definition at line 180 of file GeneMapperCsvExport.h.

References sampleFile_.

const std::string& bpp::GeneMapperCsvExport::Record::getSampleName

(

)

const [inline]

Definition at line 184 of file GeneMapperCsvExport.h.

References sampleName_.

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Member Data Documentation

std::vector< GeneMapperCsvExport::Allele > bpp::GeneMapperCsvExport::Record::alleles_ [private]

Definition at line 168 of file GeneMapperCsvExport.h.

Referenced by getAllele(), getNumberOfAllele(), and Record().

double bpp::GeneMapperCsvExport::Record::an_ [private]

Definition at line 170 of file GeneMapperCsvExport.h.

Referenced by Record().

std::string bpp::GeneMapperCsvExport::Record::dac_ [private]

Definition at line 169 of file GeneMapperCsvExport.h.

Referenced by Record().

std::string bpp::GeneMapperCsvExport::Record::dye_ [private]

Definition at line 167 of file GeneMapperCsvExport.h.

Referenced by getDye(), and Record().

std::string bpp::GeneMapperCsvExport::Record::markerName_ [private]

Definition at line 166 of file GeneMapperCsvExport.h.

Referenced by getMarkerName(), and Record().

std::string bpp::GeneMapperCsvExport::Record::panel_ [private]

Definition at line 165 of file GeneMapperCsvExport.h.

Referenced by getPanel(), and Record().

std::string bpp::GeneMapperCsvExport::Record::sampleFile_ [private]

Definition at line 163 of file GeneMapperCsvExport.h.

Referenced by getSampleFileName(), and Record().

std::string bpp::GeneMapperCsvExport::Record::sampleName_ [private]

Definition at line 164 of file GeneMapperCsvExport.h.

Referenced by getSampleName(), and Record().

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The documentation for this class was generated from the following files:

• Bpp/PopGen/GeneMapperCsvExport.h
• Bpp/PopGen/GeneMapperCsvExport.cpp