bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription Class Reference

#include <Bpp/Phyl/Likelihood/AbstractTreeLikelihood.h>

Inheritance diagram for bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription:

Collaboration diagram for bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription:

List of all members.

Public Member Functions
	ConstNoPartitionSiteModelDescription (const SubstitutionModel *model, const std::vector< int > nodesId)
	ConstNoPartitionSiteModelDescription (const ConstNoPartitionSiteModelDescription &smd)
ConstNoPartitionSiteModelDescription &	operator= (const ConstNoPartitionSiteModelDescription &smd)
const SubstitutionModel *	getModel () const
BranchIterator *	getNewBranchIterator () const
Private Attributes
const SubstitutionModel *	model_
std::vector< int >	nodesId_

---

Detailed Description

Definition at line 190 of file AbstractTreeLikelihood.h.

---

Constructor & Destructor Documentation

bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription::ConstNoPartitionSiteModelDescription	(	const SubstitutionModel *	model,
		const std::vector< int >	nodesId
	)		[inline]

Definition at line 198 of file AbstractTreeLikelihood.h.

bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription::ConstNoPartitionSiteModelDescription

(

const ConstNoPartitionSiteModelDescription &

smd

)

[inline]

Definition at line 201 of file AbstractTreeLikelihood.h.

---

Member Function Documentation

const SubstitutionModel* bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription::getModel

(

)

const [inline, virtual]

Implements bpp::TreeLikelihood::ConstSiteModelDescription.

Definition at line 214 of file AbstractTreeLikelihood.h.

References model_.

BranchIterator* bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription::getNewBranchIterator

(

)

const [inline, virtual]

Implements bpp::TreeLikelihood::ConstSiteModelDescription.

Definition at line 216 of file AbstractTreeLikelihood.h.

References nodesId_.

ConstNoPartitionSiteModelDescription& bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription::operator=

(

const ConstNoPartitionSiteModelDescription &

smd

)

[inline]

Definition at line 206 of file AbstractTreeLikelihood.h.

References model_, and nodesId_.

---

Member Data Documentation

const SubstitutionModel* bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription::model_ [private]

Definition at line 194 of file AbstractTreeLikelihood.h.

Referenced by getModel(), and operator=().

std::vector<int> bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription::nodesId_ [private]

Definition at line 195 of file AbstractTreeLikelihood.h.

Referenced by getNewBranchIterator(), and operator=().

---

The documentation for this class was generated from the following file:

• Bpp/Phyl/Likelihood/AbstractTreeLikelihood.h