bpp-phyl  2.4.0
Likelihood Directory Reference
+ Directory dependency graph for Likelihood:

Files

file  AbstractDiscreteRatesAcrossSitesTreeLikelihood.cpp [code]
 
file  AbstractDiscreteRatesAcrossSitesTreeLikelihood.h [code]
 
file  AbstractHomogeneousTreeLikelihood.cpp [code]
 
file  AbstractHomogeneousTreeLikelihood.h [code]
 
file  AbstractNonHomogeneousTreeLikelihood.cpp [code]
 
file  AbstractNonHomogeneousTreeLikelihood.h [code]
 
file  AbstractTreeLikelihood.cpp [code]
 
file  AbstractTreeLikelihood.h [code]
 
file  AbstractTreeLikelihoodData.h [code]
 
file  ClockTreeLikelihood.h [code]
 
file  DiscreteRatesAcrossSitesTreeLikelihood.h [code]
 
file  DRASDRTreeLikelihoodData.cpp [code]
 
file  DRASDRTreeLikelihoodData.h [code]
 
file  DRASRTreeLikelihoodData.cpp [code]
 
file  DRASRTreeLikelihoodData.h [code]
 
file  DRHomogeneousMixedTreeLikelihood.cpp [code]
 
file  DRHomogeneousMixedTreeLikelihood.h [code]
 
file  DRHomogeneousTreeLikelihood.cpp [code]
 
file  DRHomogeneousTreeLikelihood.h [code]
 
file  DRNonHomogeneousTreeLikelihood.cpp [code]
 
file  DRNonHomogeneousTreeLikelihood.h [code]
 
file  DRTreeLikelihood.h [code]
 
file  DRTreeLikelihoodTools.cpp [code]
 
file  DRTreeLikelihoodTools.h [code]
 
file  GlobalClockTreeLikelihoodFunctionWrapper.cpp [code]
 
file  GlobalClockTreeLikelihoodFunctionWrapper.h [code]
 
file  HomogeneousTreeLikelihood.h [code]
 
file  MarginalAncestralStateReconstruction.cpp [code]
 
file  MarginalAncestralStateReconstruction.h [code]
 
file  NNIHomogeneousTreeLikelihood.cpp [code]
 
file  NNIHomogeneousTreeLikelihood.h [code]
 
file  NonHomogeneousTreeLikelihood.h [code]
 
file  PairedSiteLikelihoods.cpp [code]
 
file  PairedSiteLikelihoods.h [code]
 
file  PseudoNewtonOptimizer.cpp [code]
 
file  PseudoNewtonOptimizer.h [code]
 
file  RASTools.cpp [code]
 
file  RASTools.h [code]
 
file  RHomogeneousClockTreeLikelihood.cpp [code]
 
file  RHomogeneousClockTreeLikelihood.h [code]
 
file  RHomogeneousMixedTreeLikelihood.cpp [code]
 
file  RHomogeneousMixedTreeLikelihood.h [code]
 
file  RHomogeneousTreeLikelihood.cpp [code]
 
file  RHomogeneousTreeLikelihood.h [code]
 
file  RNonHomogeneousMixedTreeLikelihood.cpp [code]
 
file  RNonHomogeneousMixedTreeLikelihood.h [code]
 
file  RNonHomogeneousTreeLikelihood.cpp [code]
 
file  RNonHomogeneousTreeLikelihood.h [code]
 
file  SitePartitionTreeLikelihood.h [code]
 
file  TreeLikelihood.h [code]
 
file  TreeLikelihoodData.h [code]
 
file  TreeLikelihoodTools.cpp [code]
 
file  TreeLikelihoodTools.h [code]