bpp::AbstractITree Class Reference

Partial implementation of the ITree interface. More...

#include <Bpp/Phyl/Io/IoTree.h>

Inheritance diagram for bpp::AbstractITree:

Collaboration diagram for bpp::AbstractITree:

Public Member Functions
	AbstractITree ()
virtual	~AbstractITree ()
virtual Tree *	read (std::istream &in) const =0 throw (Exception)
	Read a tree from a stream. More...
virtual Tree *	read (const std::string &path) const throw (Exception)
	Read a tree from a file. More...
virtual const std::string	getDataType () const

Detailed Description

Partial implementation of the ITree interface.

Definition at line 134 of file IoTree.h.

Constructor & Destructor Documentation

bpp::AbstractITree::AbstractITree ( )

inline

Definition at line 138 of file IoTree.h.

virtual bpp::AbstractITree::~AbstractITree ( )

inlinevirtual

Definition at line 139 of file IoTree.h.

Member Function Documentation

virtual const std::string bpp::IOTree::getDataType ( ) const

inlinevirtualinherited

Implements bpp::IOFormat.

Definition at line 68 of file IoTree.h.

virtual Tree* bpp::AbstractITree::read ( std::istream &  in ) const throw (Exception)

pure virtual

Read a tree from a stream.

Parameters

in	The input stream.

Returns

A new tree object.

Exceptions

Exception

If an error occured.

Implements bpp::ITree.

Implemented in bpp::Nhx, bpp::Newick, and bpp::NexusIOTree.

Referenced by bpp::NexusIOTree::read(), bpp::Newick::read(), read(), and bpp::Nhx::read().

virtual Tree* bpp::AbstractITree::read ( const std::string &  path ) const throw (Exception)

inlinevirtual

Read a tree from a file.

Parameters

path	The file path.

Returns

A new tree object.

Exceptions

Exception

If an error occured.

Implements bpp::ITree.

Reimplemented in bpp::Nhx, bpp::Newick, and bpp::NexusIOTree.

Definition at line 143 of file IoTree.h.

References read().

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The documentation for this class was generated from the following file:

• Bpp/Phyl/Io/IoTree.h