File List

Here is a list of all files with brief descriptions:

[detail level 12345]

Bpp
App
ApplicationTools.cpp
ApplicationTools.h
BppApplication.cpp
BppApplication.h
NumCalcApplicationTools.cpp
NumCalcApplicationTools.h
Graph
BasicONode.cpp
BasicONode.h
BasicTNode.cpp
BasicTNode.h
ONode.h
TNode.h
UNode.h
Graphics
Fig
XFigGraphicDevice.cpp
XFigGraphicDevice.h
XFigLaTeXFontManager.cpp
XFigLaTeXFontManager.h
XFigPostscriptFontManager.cpp
XFigPostscriptFontManager.h
Font
Font.cpp
Font.h
FontManager.h
Latex
DvipsColorSet.cpp
DvipsColorSet.h
PgfGraphicDevice.cpp
PgfGraphicDevice.h
Molscript
MolscriptColorSet.cpp
MolscriptColorSet.h
R
RColorSet.cpp
RColorSet.h
Svg
SvgGraphicDevice.cpp
SvgGraphicDevice.h
AbstractGraphicDevice.h
ColorManager.h
ColorSet.h
ColorTools.cpp
ColorTools.h
DefaultColorSet.h
GraphicDevice.cpp
GraphicDevice.h
Point2D.h
Point2DTools.h
RgbColor.h
Io
BppODiscreteDistributionFormat.cpp
BppODiscreteDistributionFormat.h
BppOParametrizableFormat.cpp
BppOParametrizableFormat.h
FileTools.cpp
FileTools.h
IoDiscreteDistribution.h
IoDiscreteDistributionFactory.cpp
IoDiscreteDistributionFactory.h
IoFormat.h
IoParametrizable.h
OutputStream.h
Numeric
Function
AbstractNumericalDerivative.h
AbstractOptimizer.cpp
AbstractOptimizer.h
BfgsMultiDimensions.cpp
BfgsMultiDimensions.h
BrentOneDimension.cpp
BrentOneDimension.h
ConjugateGradientMultiDimensions.cpp
ConjugateGradientMultiDimensions.h
DirectionFunction.cpp
DirectionFunction.h
DownhillSimplexMethod.cpp
DownhillSimplexMethod.h
FivePointsNumericalDerivative.cpp
FivePointsNumericalDerivative.h
Functions.h
FunctionTools.cpp
FunctionTools.h
GoldenSectionSearch.cpp
GoldenSectionSearch.h
MetaOptimizer.cpp
MetaOptimizer.h
NewtonBacktrackOneDimension.cpp
NewtonBacktrackOneDimension.h
NewtonOneDimension.cpp
NewtonOneDimension.h
OneDimensionOptimizationTools.cpp
OneDimensionOptimizationTools.h
OptimizationStopCondition.cpp
OptimizationStopCondition.h
Optimizer.h
PowellMultiDimensions.cpp
PowellMultiDimensions.h
ReparametrizationFunctionWrapper.cpp
ReparametrizationFunctionWrapper.h
SimpleMultiDimensions.cpp
SimpleMultiDimensions.h
SimpleNewtonMultiDimensions.cpp
SimpleNewtonMultiDimensions.h
ThreePointsNumericalDerivative.cpp
ThreePointsNumericalDerivative.h
TwoPointsNumericalDerivative.cpp
TwoPointsNumericalDerivative.h
Hmm
HmmEmissionProbabilities.h
HmmExceptions.h
HmmLikelihood.h
HmmStateAlphabet.h
HmmTransitionMatrix.h
LogsumHmmLikelihood.cpp
LogsumHmmLikelihood.h
LowMemoryRescaledHmmLikelihood.cpp
LowMemoryRescaledHmmLikelihood.h
RescaledHmmLikelihood.cpp
RescaledHmmLikelihood.h
Matrix
EigenValue.h
LUDecomposition.h
Matrix.h
MatrixTools.h
Prob
AbstractDiscreteDistribution.cpp
AbstractDiscreteDistribution.h
BetaDiscreteDistribution.cpp
BetaDiscreteDistribution.h
ConstantDistribution.cpp
ConstantDistribution.h
DirichletDiscreteDistribution.cpp
DirichletDiscreteDistribution.h
DiscreteDistribution.h
ExponentialDiscreteDistribution.cpp
ExponentialDiscreteDistribution.h
GammaDiscreteDistribution.cpp
GammaDiscreteDistribution.h
GaussianDiscreteDistribution.cpp
GaussianDiscreteDistribution.h
InvariantMixedDiscreteDistribution.cpp
InvariantMixedDiscreteDistribution.h
MixtureOfDiscreteDistributions.cpp
MixtureOfDiscreteDistributions.h
MultipleDiscreteDistribution.h
SimpleDiscreteDistribution.cpp
SimpleDiscreteDistribution.h
Simplex.cpp
Simplex.h
TruncatedExponentialDiscreteDistribution.cpp
TruncatedExponentialDiscreteDistribution.h
UniformDiscreteDistribution.cpp
UniformDiscreteDistribution.h
Random
ContingencyTableGenerator.cpp
ContingencyTableGenerator.h
RandomFactory.h
RandomTools.cpp
RandomTools.h
Uniform01K.cpp
Uniform01K.h
Uniform01QD.cpp
Uniform01QD.h
Uniform01WH.cpp
Uniform01WH.h
Stat
Mva
CorrespondenceAnalysis.cpp
CorrespondenceAnalysis.h
DualityDiagram.cpp
DualityDiagram.h
PrincipalComponentAnalysis.cpp
PrincipalComponentAnalysis.h
ContingencyTableTest.cpp
ContingencyTableTest.h
StatTest.h
StatTools.cpp
StatTools.h
AbstractParameterAliasable.cpp
AbstractParameterAliasable.h
AbstractParametrizable.cpp
AbstractParametrizable.h
AdaptiveKernelDensityEstimation.cpp
AdaptiveKernelDensityEstimation.h
AutoParameter.cpp
AutoParameter.h
Constraints.h
DataTable.cpp
DataTable.h
DataTableExceptions.h
Number.h
NumConstants.h
NumTools.cpp
NumTools.h
Parameter.cpp
Parameter.h
ParameterAliasable.h
ParameterExceptions.cpp
ParameterExceptions.h
ParameterList.cpp
ParameterList.h
Parametrizable.h
Range.h
TransformedParameter.h
VectorExceptions.h
VectorTools.cpp
VectorTools.h
Text
KeyvalTools.cpp
KeyvalTools.h
NestedStringTokenizer.cpp
NestedStringTokenizer.h
StringTokenizer.cpp
StringTokenizer.h
TextTools.cpp
TextTools.h
Utils
AttributesTools.cpp
AttributesTools.h
MapTools.h
BppBoolean.h
BppString.cpp
BppString.h
BppVector.h
Clonable.h
Exceptions.cpp
Exceptions.h